Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
NCK1P16333 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
NCK1P16333 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
NCK1P16333 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NCK1P16333 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
NCK1P16333 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 AC080080.1-201ENST00000625121 2420 ntBASIC17.48■□□□□ 0.39
NCK1P16333 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.48■□□□□ 0.39
NCK1P16333 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 AL138781.1-201ENST00000566567 1274 ntBASIC17.48■□□□□ 0.39
NCK1P16333 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.48■□□□□ 0.39
NCK1P16333 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.48■□□□□ 0.39
NCK1P16333 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NCK1P16333 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.48■□□□□ 0.39
NCK1P16333 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.48■□□□□ 0.39
NCK1P16333 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NCK1P16333 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NCK1P16333 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 PRORSD1P-202ENST00000563365 2154 ntBASIC17.47■□□□□ 0.39
NCK1P16333 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NCK1P16333 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 SLC25A6P5-201ENST00000435663 894 ntBASIC17.47■□□□□ 0.39
NCK1P16333 UNC93B4-201ENST00000505679 747 ntBASIC17.47■□□□□ 0.39
NCK1P16333 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NCK1P16333 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.47■□□□□ 0.39
NCK1P16333 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
NCK1P16333 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NCK1P16333 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NCK1P16333 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.47■□□□□ 0.39
NCK1P16333 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.47■□□□□ 0.39
NCK1P16333 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
NCK1P16333 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.46■□□□□ 0.39
NCK1P16333 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.46■□□□□ 0.39
NCK1P16333 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.46■□□□□ 0.39
NCK1P16333 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 POM121L13P-201ENST00000422362 380 ntBASIC17.46■□□□□ 0.39
NCK1P16333 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
NCK1P16333 NCF1B-203ENST00000435988 1254 ntBASIC17.46■□□□□ 0.39
NCK1P16333 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.46■□□□□ 0.39
NCK1P16333 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.46■□□□□ 0.39
NCK1P16333 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 AC004264.1-201ENST00000608354 794 ntBASIC17.46■□□□□ 0.39
NCK1P16333 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NCK1P16333 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.46■□□□□ 0.39
NCK1P16333 AL645608.8-201ENST00000606034 2086 ntBASIC17.46■□□□□ 0.39
NCK1P16333 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms