Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC130P13994 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC130P13994 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC130P13994 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC130P13994 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC130P13994 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC130P13994 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
CCDC130P13994 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC130P13994 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC130P13994 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCDC130P13994 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 HBZP1-201ENST00000354915 429 ntBASIC19.55■□□□□ 0.72
CCDC130P13994 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC130P13994 SPDYE13P-201ENST00000445314 798 ntBASIC19.55■□□□□ 0.72
CCDC130P13994 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 VENTXP5-201ENST00000523979 775 ntBASIC19.55■□□□□ 0.72
CCDC130P13994 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC130P13994 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC130P13994 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC130P13994 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CCDC130P13994 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC130P13994 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC130P13994 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC130P13994 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC130P13994 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC130P13994 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC130P13994 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC130P13994 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 MIR3180-4-201ENST00000582223 153 ntBASIC19.54■□□□□ 0.72
CCDC130P13994 AL136038.4-201ENST00000603606 1261 ntBASIC19.54■□□□□ 0.72
CCDC130P13994 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC130P13994 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC130P13994 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC130P13994 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC130P13994 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC130P13994 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC130P13994 WIZP1-201ENST00000531444 2299 ntBASIC19.53■□□□□ 0.72
CCDC130P13994 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 AL391807.1-203ENST00000604392 2365 ntBASIC19.53■□□□□ 0.72
CCDC130P13994 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC130P13994 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC130P13994 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC130P13994 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC130P13994 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC130P13994 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC130P13994 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms