Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCL4P13236 AL662844.1-201ENST00000546340 181 ntBASIC17.43■□□□□ 0.38
CCL4P13236 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL4P13236 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CCL4P13236 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCL4P13236 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL4P13236 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 AL161938.1-201ENST00000569833 2180 ntBASIC17.43■□□□□ 0.38
CCL4P13236 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL4P13236 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCL4P13236 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL4P13236 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCL4P13236 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCL4P13236 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 AP000593.1-201ENST00000393668 712 ntBASIC17.42■□□□□ 0.38
CCL4P13236 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CCL4P13236 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.42■□□□□ 0.38
CCL4P13236 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 REXO1L6P-202ENST00000619970 1078 ntBASIC17.42■□□□□ 0.38
CCL4P13236 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL4P13236 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 HLA-A-201ENST00000376802 1334 ntBASIC17.42■□□□□ 0.38
CCL4P13236 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL4P13236 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCL4P13236 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL4P13236 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCL4P13236 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCL4P13236 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL4P13236 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCL4P13236 SAPCD2P3-201ENST00000455031 850 ntBASIC17.41■□□□□ 0.38
CCL4P13236 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.41■□□□□ 0.38
CCL4P13236 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL4P13236 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL4P13236 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.41■□□□□ 0.38
CCL4P13236 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCL4P13236 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL4P13236 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL4P13236 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL4P13236 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL4P13236 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL4P13236 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL4P13236 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL4P13236 TSPY12P-201ENST00000421279 868 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms