Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 AC104390.1-201ENST00000555663 520 ntBASIC20.21■□□□□ 0.83
CLTAP09496 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.21■□□□□ 0.83
CLTAP09496 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.21■□□□□ 0.83
CLTAP09496 MYC-208ENST00000641036 567 ntBASIC20.21■□□□□ 0.83
CLTAP09496 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLTAP09496 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.21■□□□□ 0.83
CLTAP09496 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLTAP09496 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLTAP09496 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLTAP09496 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 AC005082.1-201ENST00000413042 2259 ntBASIC20.2■□□□□ 0.82
CLTAP09496 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.2■□□□□ 0.82
CLTAP09496 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.2■□□□□ 0.82
CLTAP09496 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.2■□□□□ 0.82
CLTAP09496 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
CLTAP09496 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLTAP09496 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 RASA4DP-201ENST00000460726 1199 ntBASIC20.19■□□□□ 0.82
CLTAP09496 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.19■□□□□ 0.82
CLTAP09496 KRT18P41-201ENST00000518924 1277 ntBASIC20.19■□□□□ 0.82
CLTAP09496 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.19■□□□□ 0.82
CLTAP09496 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 AC087388.1-201ENST00000571370 1112 ntBASIC20.19■□□□□ 0.82
CLTAP09496 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.19■□□□□ 0.82
CLTAP09496 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CLTAP09496 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLTAP09496 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLTAP09496 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.19■□□□□ 0.82
CLTAP09496 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLTAP09496 AL031598.1-201ENST00000561511 1773 ntBASIC20.18■□□□□ 0.82
CLTAP09496 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLTAP09496 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLTAP09496 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 SPDYE15P-201ENST00000424157 909 ntBASIC20.18■□□□□ 0.82
CLTAP09496 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.18■□□□□ 0.82
CLTAP09496 MIR3917-201ENST00000580971 93 ntBASIC20.18■□□□□ 0.82
CLTAP09496 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CLTAP09496 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.18■□□□□ 0.82
CLTAP09496 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLTAP09496 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.18■□□□□ 0.82
CLTAP09496 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLTAP09496 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.17■□□□□ 0.82
CLTAP09496 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.17■□□□□ 0.82
CLTAP09496 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.17■□□□□ 0.82
CLTAP09496 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
CLTAP09496 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLTAP09496 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms