Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
COL4A2P08572 RCN1P2-201ENST00000398357 915 ntBASIC18.58■□□□□ 0.57
COL4A2P08572 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COL4A2P08572 RPL13AP23-201ENST00000480739 586 ntBASIC18.58■□□□□ 0.57
COL4A2P08572 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.58■□□□□ 0.57
COL4A2P08572 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COL4A2P08572 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A2P08572 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A2P08572 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A2P08572 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
COL4A2P08572 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A2P08572 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
COL4A2P08572 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL4A2P08572 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL4A2P08572 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.58■□□□□ 0.56
COL4A2P08572 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
COL4A2P08572 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL4A2P08572 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.57■□□□□ 0.56
COL4A2P08572 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A2P08572 TERC-201ENST00000602385 541 ntBASIC18.57■□□□□ 0.56
COL4A2P08572 AC140113.2-201ENST00000604370 208 ntBASIC18.57■□□□□ 0.56
COL4A2P08572 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.57■□□□□ 0.56
COL4A2P08572 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 AC021087.4-201ENST00000563761 564 ntBASIC18.57■□□□□ 0.56
COL4A2P08572 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.57■□□□□ 0.56
COL4A2P08572 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 AC009102.3-201ENST00000623118 1491 ntBASIC18.57■□□□□ 0.56
COL4A2P08572 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.57■□□□□ 0.56
COL4A2P08572 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL4A2P08572 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL4A2P08572 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A2P08572 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL4A2P08572 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL4A2P08572 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL4A2P08572 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.56■□□□□ 0.56
COL4A2P08572 AC098831.1-202ENST00000438821 336 ntBASIC18.56■□□□□ 0.56
COL4A2P08572 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.56■□□□□ 0.56
COL4A2P08572 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.56■□□□□ 0.56
COL4A2P08572 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.56■□□□□ 0.56
COL4A2P08572 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A2P08572 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.56■□□□□ 0.56
COL4A2P08572 AC010327.4-202ENST00000591484 748 ntBASIC18.56■□□□□ 0.56
COL4A2P08572 MTDHP3-201ENST00000594186 672 ntBASIC18.56■□□□□ 0.56
COL4A2P08572 AC011467.2-201ENST00000598425 242 ntBASIC18.56■□□□□ 0.56
COL4A2P08572 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.56■□□□□ 0.56
COL4A2P08572 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
COL4A2P08572 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
COL4A2P08572 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL4A2P08572 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 FAM215A-202ENST00000632077 792 ntBASIC18.55■□□□□ 0.56
COL4A2P08572 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.55■□□□□ 0.56
COL4A2P08572 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 AP005117.1-201ENST00000584346 1413 ntBASIC18.55■□□□□ 0.56
COL4A2P08572 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL4A2P08572 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COL4A2P08572 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL4A2P08572 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL4A2P08572 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL4A2P08572 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.54■□□□□ 0.56
COL4A2P08572 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.54■□□□□ 0.56
COL4A2P08572 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.54■□□□□ 0.56
COL4A2P08572 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
COL4A2P08572 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL4A2P08572 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL4A2P08572 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.54■□□□□ 0.56
COL4A2P08572 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms