Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 AC034236.2-201ENST00000606662 1610 ntBASIC19.36■□□□□ 0.69
APOEP02649 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 MTMR9LP-203ENST00000426597 1545 ntBASIC19.35■□□□□ 0.69
APOEP02649 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
APOEP02649 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
APOEP02649 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
APOEP02649 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.35■□□□□ 0.69
APOEP02649 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 AC104581.1-202ENST00000635932 2618 ntBASIC19.35■□□□□ 0.69
APOEP02649 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
APOEP02649 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.35■□□□□ 0.69
APOEP02649 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 RNF152P1-201ENST00000397754 604 ntBASIC19.35■□□□□ 0.69
APOEP02649 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.35■□□□□ 0.69
APOEP02649 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.35■□□□□ 0.69
APOEP02649 AC011558.1-201ENST00000623459 338 ntBASIC19.35■□□□□ 0.69
APOEP02649 AC112497.1-201ENST00000624824 639 ntBASIC19.35■□□□□ 0.69
APOEP02649 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 AC009113.1-201ENST00000570267 2443 ntBASIC19.35■□□□□ 0.69
APOEP02649 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOEP02649 AL357033.4-201ENST00000617703 1807 ntBASIC19.35■□□□□ 0.69
APOEP02649 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
APOEP02649 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 KRT8P7-201ENST00000533003 1432 ntBASIC19.34■□□□□ 0.69
APOEP02649 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.34■□□□□ 0.69
APOEP02649 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.34■□□□□ 0.69
APOEP02649 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.34■□□□□ 0.69
APOEP02649 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
APOEP02649 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
APOEP02649 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
APOEP02649 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
APOEP02649 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.34■□□□□ 0.69
APOEP02649 KRT18P23-201ENST00000435622 1283 ntBASIC19.34■□□□□ 0.69
APOEP02649 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.34■□□□□ 0.69
APOEP02649 AC092647.4-201ENST00000457211 535 ntBASIC19.34■□□□□ 0.69
APOEP02649 LINC01238-205ENST00000567549 1107 ntBASIC19.34■□□□□ 0.69
APOEP02649 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.34■□□□□ 0.69
APOEP02649 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
APOEP02649 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.34■□□□□ 0.69
APOEP02649 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOEP02649 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.33■□□□□ 0.69
APOEP02649 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
APOEP02649 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.69
APOEP02649 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOEP02649 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
APOEP02649 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
APOEP02649 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
APOEP02649 TSPY5P-201ENST00000426936 936 ntBASIC19.33■□□□□ 0.68
APOEP02649 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOEP02649 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.33■□□□□ 0.68
APOEP02649 AL441883.1-201ENST00000566170 1045 ntBASIC19.33■□□□□ 0.68
APOEP02649 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.33■□□□□ 0.68
APOEP02649 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.33■□□□□ 0.68
APOEP02649 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms