Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IFNA1P01562 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.65□□□□□ -0.06
IFNA1P01562 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
IFNA1P01562 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.64□□□□□ -0.07
IFNA1P01562 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.64□□□□□ -0.07
IFNA1P01562 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.64□□□□□ -0.07
IFNA1P01562 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IFNA1P01562 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.64□□□□□ -0.07
IFNA1P01562 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 KRT8P8-201ENST00000434750 1448 ntBASIC14.64□□□□□ -0.07
IFNA1P01562 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 AC108860.2-201ENST00000562760 2183 ntBASIC14.64□□□□□ -0.07
IFNA1P01562 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.64□□□□□ -0.07
IFNA1P01562 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IFNA1P01562 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.64□□□□□ -0.07
IFNA1P01562 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
IFNA1P01562 AC093677.2-201ENST00000600169 1863 ntBASIC14.63□□□□□ -0.07
IFNA1P01562 AL023806.1-201ENST00000603994 1649 ntBASIC14.63□□□□□ -0.07
IFNA1P01562 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 MIR600HG-201ENST00000449175 5984 ntBASIC14.63□□□□□ -0.07
IFNA1P01562 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.63□□□□□ -0.07
IFNA1P01562 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
IFNA1P01562 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.63□□□□□ -0.07
IFNA1P01562 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 AC091305.1-201ENST00000479476 895 ntBASIC14.63□□□□□ -0.07
IFNA1P01562 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.63□□□□□ -0.07
IFNA1P01562 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.63□□□□□ -0.07
IFNA1P01562 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
IFNA1P01562 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.63□□□□□ -0.07
IFNA1P01562 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.63□□□□□ -0.07
IFNA1P01562 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IFNA1P01562 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
IFNA1P01562 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.62□□□□□ -0.07
IFNA1P01562 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
IFNA1P01562 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms