Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 AC034232.1-201ENST00000506026 1064 ntBASIC19.18■□□□□ 0.66
ALDH1A2O94788 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ALDH1A2O94788 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A2O94788 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.17■□□□□ 0.66
ALDH1A2O94788 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 CLEC4GP1-201ENST00000596555 870 ntBASIC19.17■□□□□ 0.66
ALDH1A2O94788 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ALDH1A2O94788 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALDH1A2O94788 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 AC135050.7-201ENST00000624508 2218 ntBASIC19.16■□□□□ 0.66
ALDH1A2O94788 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.16■□□□□ 0.66
ALDH1A2O94788 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.16■□□□□ 0.66
ALDH1A2O94788 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALDH1A2O94788 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.15■□□□□ 0.66
ALDH1A2O94788 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.15■□□□□ 0.66
ALDH1A2O94788 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.15■□□□□ 0.66
ALDH1A2O94788 AC005082.1-201ENST00000413042 2259 ntBASIC19.15■□□□□ 0.66
ALDH1A2O94788 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.15■□□□□ 0.66
ALDH1A2O94788 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 HYMAI.1-201ENST00000620949 238 ntBASIC19.15■□□□□ 0.66
ALDH1A2O94788 CR769767.2-201ENST00000622735 460 ntBASIC19.15■□□□□ 0.66
ALDH1A2O94788 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALDH1A2O94788 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms