Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPXO76031 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLPXO76031 AC073210.2-201ENST00000430369 194 ntBASIC16.79■□□□□ 0.28
CLPXO76031 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.79■□□□□ 0.28
CLPXO76031 AC133552.2-202ENST00000575694 574 ntBASIC16.79■□□□□ 0.28
CLPXO76031 AC100791.3-201ENST00000617619 330 ntBASIC16.79■□□□□ 0.28
CLPXO76031 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLPXO76031 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLPXO76031 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPXO76031 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLPXO76031 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPXO76031 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.78■□□□□ 0.28
CLPXO76031 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.78■□□□□ 0.28
CLPXO76031 TSPY20P-201ENST00000450910 630 ntBASIC16.78■□□□□ 0.28
CLPXO76031 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 AF201337.1-201ENST00000520239 748 ntBASIC16.78■□□□□ 0.28
CLPXO76031 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 AL138781.1-201ENST00000566567 1274 ntBASIC16.78■□□□□ 0.28
CLPXO76031 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 AC133041.1-202ENST00000642053 222 ntBASIC16.78■□□□□ 0.28
CLPXO76031 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPXO76031 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPXO76031 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPXO76031 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CLPXO76031 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 AP001094.4-201ENST00000579008 2176 ntBASIC16.77■□□□□ 0.28
CLPXO76031 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 MCRIP2P1-201ENST00000394346 511 ntBASIC16.77■□□□□ 0.28
CLPXO76031 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 AC069152.1-201ENST00000438030 544 ntBASIC16.77■□□□□ 0.28
CLPXO76031 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.77■□□□□ 0.28
CLPXO76031 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CLPXO76031 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.77■□□□□ 0.28
CLPXO76031 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLPXO76031 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.77■□□□□ 0.28
CLPXO76031 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
CLPXO76031 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLPXO76031 AL121761.2-201ENST00000598007 1648 ntBASIC16.77■□□□□ 0.27
CLPXO76031 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms