Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC8.21□□□□□ -1.09
USH2AO75445 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 OR7E47P-204ENST00000575924 449 ntBASIC8.21□□□□□ -1.09
USH2AO75445 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC8.21□□□□□ -1.09
USH2AO75445 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC8.21□□□□□ -1.09
USH2AO75445 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC8.21□□□□□ -1.09
USH2AO75445 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 DANCR-204ENST00000444958 709 ntTSL 3 BASIC8.21□□□□□ -1.09
USH2AO75445 INGX-202ENST00000489074 768 ntBASIC8.21□□□□□ -1.09
USH2AO75445 AC093214.1-201ENST00000511688 1107 ntBASIC8.21□□□□□ -1.09
USH2AO75445 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
USH2AO75445 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 GAS2L1P1-201ENST00000420145 1480 ntBASIC8.21□□□□□ -1.1
USH2AO75445 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC8.21□□□□□ -1.1
USH2AO75445 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC8.21□□□□□ -1.1
USH2AO75445 AC008761.3-201ENST00000624803 892 ntBASIC8.21□□□□□ -1.1
USH2AO75445 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 AC006128.1-201ENST00000624704 1661 ntBASIC8.21□□□□□ -1.1
USH2AO75445 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
USH2AO75445 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC8.21□□□□□ -1.1
USH2AO75445 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC8.21□□□□□ -1.1
USH2AO75445 ATP5G2P4-201ENST00000442175 420 ntBASIC8.21□□□□□ -1.1
USH2AO75445 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 AC051619.7-201ENST00000568314 623 ntBASIC8.21□□□□□ -1.1
USH2AO75445 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC8.21□□□□□ -1.1
USH2AO75445 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
USH2AO75445 LINC00628-201ENST00000628516 1289 ntBASIC8.21□□□□□ -1.1
USH2AO75445 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC8.21□□□□□ -1.1
USH2AO75445 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
USH2AO75445 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 CBR1-202ENST00000399191 838 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 AC018845.2-201ENST00000568326 409 ntBASIC8.2□□□□□ -1.1
USH2AO75445 RN7SL204P-201ENST00000582831 262 ntBASIC8.2□□□□□ -1.1
USH2AO75445 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC8.2□□□□□ -1.1
USH2AO75445 GALT-202ENST00000450095 1280 ntTSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC8.2□□□□□ -1.1
USH2AO75445 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC8.2□□□□□ -1.1
USH2AO75445 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC8.2□□□□□ -1.1
USH2AO75445 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC8.2□□□□□ -1.1
USH2AO75445 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC8.2□□□□□ -1.1
USH2AO75445 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
USH2AO75445 TERF1P3-201ENST00000505638 1227 ntBASIC8.2□□□□□ -1.1
USH2AO75445 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 RPS29-206ENST00000557111 488 ntTSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 AC015911.4-201ENST00000588022 1070 ntBASIC8.2□□□□□ -1.1
USH2AO75445 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC8.2□□□□□ -1.1
USH2AO75445 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
USH2AO75445 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 AC026310.3-201ENST00000625186 2373 ntBASIC8.2□□□□□ -1.1
USH2AO75445 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
USH2AO75445 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC8.2□□□□□ -1.1
USH2AO75445 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms