Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 PRORSD1P-201ENST00000295112 541 ntBASIC17.55■□□□□ 0.4
SCN2BO60939 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.55■□□□□ 0.4
SCN2BO60939 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.55■□□□□ 0.4
SCN2BO60939 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.55■□□□□ 0.4
SCN2BO60939 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SCN2BO60939 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SCN2BO60939 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCN2BO60939 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.54■□□□□ 0.4
SCN2BO60939 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.54■□□□□ 0.4
SCN2BO60939 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCN2BO60939 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.54■□□□□ 0.4
SCN2BO60939 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.54■□□□□ 0.4
SCN2BO60939 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 FAM197Y4-202ENST00000622692 608 ntBASIC17.54■□□□□ 0.4
SCN2BO60939 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 GPAT2P1-201ENST00000444924 1672 ntBASIC17.54■□□□□ 0.4
SCN2BO60939 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
SCN2BO60939 AL135905.2-201ENST00000584934 1404 ntBASIC17.54■□□□□ 0.4
SCN2BO60939 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCN2BO60939 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SCN2BO60939 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.53■□□□□ 0.4
SCN2BO60939 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.53■□□□□ 0.4
SCN2BO60939 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 TSPY20P-201ENST00000450910 630 ntBASIC17.53■□□□□ 0.4
SCN2BO60939 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.53■□□□□ 0.4
SCN2BO60939 DGCR10-201ENST00000609839 495 ntBASIC17.53■□□□□ 0.4
SCN2BO60939 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCN2BO60939 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SCN2BO60939 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCN2BO60939 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCN2BO60939 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN2BO60939 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.52■□□□□ 0.4
SCN2BO60939 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SCN2BO60939 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SCN2BO60939 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SCN2BO60939 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCN2BO60939 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCN2BO60939 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms