Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.89■□□□□ 0.45
GFRA3O60609 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.89■□□□□ 0.45
GFRA3O60609 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 AC006557.2-201ENST00000592985 1240 ntBASIC17.89■□□□□ 0.45
GFRA3O60609 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.89■□□□□ 0.45
GFRA3O60609 AL606495.2-201ENST00000605867 535 ntBASIC17.89■□□□□ 0.45
GFRA3O60609 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.89■□□□□ 0.45
GFRA3O60609 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.88■□□□□ 0.45
GFRA3O60609 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 AC034236.2-201ENST00000606662 1610 ntBASIC17.88■□□□□ 0.45
GFRA3O60609 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.88■□□□□ 0.45
GFRA3O60609 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
GFRA3O60609 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.88■□□□□ 0.45
GFRA3O60609 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.88■□□□□ 0.45
GFRA3O60609 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.88■□□□□ 0.45
GFRA3O60609 AC002472.2-201ENST00000442739 958 ntBASIC17.88■□□□□ 0.45
GFRA3O60609 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.88■□□□□ 0.45
GFRA3O60609 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GFRA3O60609 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.88■□□□□ 0.45
GFRA3O60609 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GFRA3O60609 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.88■□□□□ 0.45
GFRA3O60609 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.88■□□□□ 0.45
GFRA3O60609 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GFRA3O60609 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GFRA3O60609 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
GFRA3O60609 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.87■□□□□ 0.45
GFRA3O60609 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.87■□□□□ 0.45
GFRA3O60609 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
GFRA3O60609 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
GFRA3O60609 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
GFRA3O60609 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.87■□□□□ 0.45
GFRA3O60609 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.87■□□□□ 0.45
GFRA3O60609 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
GFRA3O60609 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.87■□□□□ 0.45
GFRA3O60609 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.87■□□□□ 0.45
GFRA3O60609 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
GFRA3O60609 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.87■□□□□ 0.45
GFRA3O60609 AC084346.2-201ENST00000607097 949 ntBASIC17.87■□□□□ 0.45
GFRA3O60609 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GFRA3O60609 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.87■□□□□ 0.45
GFRA3O60609 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
GFRA3O60609 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GFRA3O60609 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms