Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.75■□□□□ 0.75
HOXA2O43364 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.75■□□□□ 0.75
HOXA2O43364 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXA2O43364 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXA2O43364 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXA2O43364 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA2O43364 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HOXA2O43364 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA2O43364 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 AKR1C7P-201ENST00000305623 895 ntBASIC19.74■□□□□ 0.75
HOXA2O43364 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA2O43364 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
HOXA2O43364 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA2O43364 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA2O43364 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA2O43364 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXA2O43364 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA2O43364 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA2O43364 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA2O43364 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA2O43364 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
HOXA2O43364 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXA2O43364 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA2O43364 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA2O43364 AC091607.1-201ENST00000490318 1060 ntBASIC19.73■□□□□ 0.75
HOXA2O43364 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXA2O43364 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA2O43364 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXA2O43364 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 AC112777.1-201ENST00000540175 1423 ntBASIC19.73■□□□□ 0.75
HOXA2O43364 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA2O43364 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA2O43364 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXA2O43364 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 AL022342.1-201ENST00000400363 863 ntBASIC19.72■□□□□ 0.75
HOXA2O43364 TSPY12P-201ENST00000421279 868 ntBASIC19.72■□□□□ 0.75
HOXA2O43364 AL591684.3-201ENST00000605187 298 ntBASIC19.72■□□□□ 0.75
HOXA2O43364 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXA2O43364 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXA2O43364 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA2O43364 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA2O43364 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA2O43364 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA2O43364 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms