Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLOCKO15516 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLOCKO15516 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 AC135776.1-201ENST00000319817 2481 ntBASIC17.56■□□□□ 0.4
CLOCKO15516 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.56■□□□□ 0.4
CLOCKO15516 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLOCKO15516 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLOCKO15516 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.55■□□□□ 0.4
CLOCKO15516 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CLOCKO15516 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
CLOCKO15516 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.55■□□□□ 0.4
CLOCKO15516 KRT18P16-201ENST00000510337 1294 ntBASIC17.55■□□□□ 0.4
CLOCKO15516 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 AC233263.1-201ENST00000578059 224 ntBASIC17.55■□□□□ 0.4
CLOCKO15516 AC069544.1-201ENST00000609399 999 ntBASIC17.55■□□□□ 0.4
CLOCKO15516 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLOCKO15516 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLOCKO15516 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.54■□□□□ 0.4
CLOCKO15516 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLOCKO15516 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLOCKO15516 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.54■□□□□ 0.4
CLOCKO15516 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.54■□□□□ 0.4
CLOCKO15516 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.54■□□□□ 0.4
CLOCKO15516 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.54■□□□□ 0.4
CLOCKO15516 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.54■□□□□ 0.4
CLOCKO15516 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.54■□□□□ 0.4
CLOCKO15516 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.54■□□□□ 0.4
CLOCKO15516 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.54■□□□□ 0.4
CLOCKO15516 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.54■□□□□ 0.4
CLOCKO15516 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.54■□□□□ 0.4
CLOCKO15516 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLOCKO15516 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.54■□□□□ 0.4
CLOCKO15516 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.53■□□□□ 0.4
CLOCKO15516 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLOCKO15516 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLOCKO15516 POM121L13P-201ENST00000422362 380 ntBASIC17.53■□□□□ 0.4
CLOCKO15516 UBE2SP1-201ENST00000450587 669 ntBASIC17.53■□□□□ 0.4
CLOCKO15516 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLOCKO15516 RPPH1-201ENST00000516869 333 ntBASIC17.53■□□□□ 0.4
CLOCKO15516 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms