Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.3■□□□□ 0.52
TLR4O00206 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR4O00206 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR4O00206 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TLR4O00206 AC141586.3-201ENST00000562166 1838 ntBASIC18.3■□□□□ 0.52
TLR4O00206 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR4O00206 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR4O00206 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
TLR4O00206 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
TLR4O00206 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TLR4O00206 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TLR4O00206 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TLR4O00206 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TLR4O00206 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.29■□□□□ 0.52
TLR4O00206 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.29■□□□□ 0.52
TLR4O00206 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TLR4O00206 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.29■□□□□ 0.52
TLR4O00206 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.29■□□□□ 0.52
TLR4O00206 AC090616.6-201ENST00000582640 721 ntBASIC18.29■□□□□ 0.52
TLR4O00206 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.29■□□□□ 0.52
TLR4O00206 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TLR4O00206 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TLR4O00206 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.29■□□□□ 0.52
TLR4O00206 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TLR4O00206 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR4O00206 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TLR4O00206 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.28■□□□□ 0.52
TLR4O00206 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR4O00206 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR4O00206 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TLR4O00206 AC246785.2-201ENST00000432512 513 ntBASIC18.28■□□□□ 0.52
TLR4O00206 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR4O00206 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR4O00206 FAAHP1-202ENST00000446499 1238 ntBASIC18.28■□□□□ 0.52
TLR4O00206 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TLR4O00206 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.28■□□□□ 0.52
TLR4O00206 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.28■□□□□ 0.52
TLR4O00206 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TLR4O00206 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TLR4O00206 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 TOB2P1-201ENST00000469761 992 ntBASIC18.27■□□□□ 0.52
TLR4O00206 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.27■□□□□ 0.52
TLR4O00206 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.27■□□□□ 0.52
TLR4O00206 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
TLR4O00206 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.27■□□□□ 0.52
TLR4O00206 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.27■□□□□ 0.52
TLR4O00206 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.27■□□□□ 0.52
TLR4O00206 IGHV3-41-201ENST00000613121 348 ntBASIC18.27■□□□□ 0.52
TLR4O00206 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.27■□□□□ 0.52
TLR4O00206 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TLR4O00206 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.27■□□□□ 0.52
TLR4O00206 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.27■□□□□ 0.51
TLR4O00206 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TLR4O00206 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms