Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX39AO00148 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX39AO00148 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.78■□□□□ 0.92
DDX39AO00148 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX39AO00148 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX39AO00148 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DDX39AO00148 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.78■□□□□ 0.92
DDX39AO00148 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.78■□□□□ 0.92
DDX39AO00148 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
DDX39AO00148 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 ANO7L1-203ENST00000602586 1720 ntBASIC20.78■□□□□ 0.92
DDX39AO00148 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDX39AO00148 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX39AO00148 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.77■□□□□ 0.92
DDX39AO00148 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX39AO00148 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX39AO00148 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX39AO00148 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX39AO00148 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.77■□□□□ 0.92
DDX39AO00148 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.77■□□□□ 0.92
DDX39AO00148 AC138932.1-201ENST00000534164 6830 ntBASIC20.77■□□□□ 0.92
DDX39AO00148 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDX39AO00148 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
DDX39AO00148 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DDX39AO00148 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DDX39AO00148 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
DDX39AO00148 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDX39AO00148 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX39AO00148 KRT18P41-201ENST00000518924 1277 ntBASIC20.76■□□□□ 0.91
DDX39AO00148 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX39AO00148 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX39AO00148 AL163051.1-201ENST00000569214 1512 ntBASIC20.76■□□□□ 0.91
DDX39AO00148 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX39AO00148 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX39AO00148 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
DDX39AO00148 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
DDX39AO00148 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDX39AO00148 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.76■□□□□ 0.91
DDX39AO00148 AC098818.2-201ENST00000564925 2320 ntBASIC20.76■□□□□ 0.91
DDX39AO00148 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DDX39AO00148 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDX39AO00148 AL162741.1-201ENST00000565563 1558 ntBASIC20.76■□□□□ 0.91
DDX39AO00148 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DDX39AO00148 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
DDX39AO00148 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDX39AO00148 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX39AO00148 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 PVRIG2P-201ENST00000435460 978 ntBASIC20.75■□□□□ 0.91
DDX39AO00148 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX39AO00148 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
DDX39AO00148 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX39AO00148 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX39AO00148 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DDX39AO00148 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX39AO00148 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
DDX39AO00148 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX39AO00148 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX39AO00148 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX39AO00148 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 AP000593.1-201ENST00000393668 712 ntBASIC20.74■□□□□ 0.91
DDX39AO00148 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX39AO00148 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX39AO00148 AC069148.1-201ENST00000608741 768 ntBASIC20.74■□□□□ 0.91
DDX39AO00148 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX39AO00148 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX39AO00148 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX39AO00148 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms