Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 MYC-209ENST00000641252 345 ntBASIC16.12■□□□□ 0.17
SHISA3A0PJX4 AC073111.5-205ENST00000641717 521 ntBASIC16.12■□□□□ 0.17
SHISA3A0PJX4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 HTR7P1-201ENST00000538670 1336 ntBASIC16.12■□□□□ 0.17
SHISA3A0PJX4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SHISA3A0PJX4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 MIR663A-201ENST00000385250 93 ntBASIC16.11■□□□□ 0.17
SHISA3A0PJX4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.11■□□□□ 0.17
SHISA3A0PJX4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 AC060766.5-201ENST00000590539 871 ntBASIC16.11■□□□□ 0.17
SHISA3A0PJX4 AC008687.6-201ENST00000596318 630 ntBASIC16.11■□□□□ 0.17
SHISA3A0PJX4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHISA3A0PJX4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms