Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV9-2A0A087WT02 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 OR6D1P-203ENST00000641209 4860 ntBASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV9-2A0A087WT02 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 HLA-B-256ENST00000639848 1089 ntBASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV9-2A0A087WT02 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV9-2A0A087WT02 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.2
TRAV9-2A0A087WT02 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV9-2A0A087WT02 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.77□□□□□ -0.2
TRAV9-2A0A087WT02 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV9-2A0A087WT02 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV9-2A0A087WT02 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
TRAV9-2A0A087WT02 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms