Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL691432.2-201ENST00000607222 2038 ntBASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.35■■□□□ 1.17
ZC3H4Q9UPT8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AC244107.1-201ENST00000442033 332 ntBASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 OR7E14P-202ENST00000530490 1290 ntBASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AC008735.5-201ENST00000623544 497 ntBASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZC3H4Q9UPT8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 FAM8A3P-201ENST00000427218 844 ntBASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
ZC3H4Q9UPT8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ZC3H4Q9UPT8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC005336.2-201ENST00000593183 939 ntBASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC092364.2-202ENST00000597012 1073 ntBASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 AP005117.1-201ENST00000584346 1413 ntBASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZC3H4Q9UPT8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 AC009533.2-201ENST00000543664 586 ntBASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 AC012640.2-201ENST00000561606 901 ntBASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 AC006333.2-201ENST00000607957 2099 ntBASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.31■■□□□ 1.16
ZC3H4Q9UPT8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms