Protein–RNA interactions for Protein: Q9ULB5

CDH7, Cadherin-7, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7Q9ULB5 TREX1-205ENST00000625293 1783 ntBASIC19.26■□□□□ 0.67
CDH7Q9ULB5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH7Q9ULB5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 RN7SL606P-201ENST00000472779 293 ntBASIC19.25■□□□□ 0.67
CDH7Q9ULB5 AC079776.4-201ENST00000511039 504 ntBASIC19.25■□□□□ 0.67
CDH7Q9ULB5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.25■□□□□ 0.67
CDH7Q9ULB5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
CDH7Q9ULB5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH7Q9ULB5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 AC023511.2-201ENST00000618803 211 ntBASIC19.24■□□□□ 0.67
CDH7Q9ULB5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.24■□□□□ 0.67
CDH7Q9ULB5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH7Q9ULB5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
CDH7Q9ULB5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 MRPL3P1-201ENST00000400109 1033 ntBASIC19.23■□□□□ 0.67
CDH7Q9ULB5 VENTXP7-201ENST00000475503 772 ntBASIC19.23■□□□□ 0.67
CDH7Q9ULB5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 GPALPP1-207ENST00000611650 899 ntBASIC19.23■□□□□ 0.67
CDH7Q9ULB5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH7Q9ULB5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH7Q9ULB5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.22■□□□□ 0.67
CDH7Q9ULB5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH7Q9ULB5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH7Q9ULB5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH7Q9ULB5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH7Q9ULB5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms