Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PNMA3Q9UL41 AF186996.4-201ENST00000467186 377 ntBASIC21.27■■□□□ 1
PNMA3Q9UL41 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.27■■□□□ 1
PNMA3Q9UL41 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.27■■□□□ 1
PNMA3Q9UL41 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.27■■□□□ 1
PNMA3Q9UL41 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA3Q9UL41 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.27■■□□□ 1
PNMA3Q9UL41 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA3Q9UL41 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA3Q9UL41 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 KRT18P67-201ENST00000432816 1264 ntBASIC21.26■□□□□ 0.99
PNMA3Q9UL41 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 BNIP3P18-201ENST00000593976 575 ntBASIC21.26■□□□□ 0.99
PNMA3Q9UL41 AF228730.7-201ENST00000641842 219 ntBASIC21.26■□□□□ 0.99
PNMA3Q9UL41 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 AC141586.3-201ENST00000562166 1838 ntBASIC21.26■□□□□ 0.99
PNMA3Q9UL41 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PNMA3Q9UL41 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 AC093909.1-201ENST00000504731 1122 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 AC096582.2-201ENST00000510860 516 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 RNA5SP419-201ENST00000515908 135 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 KRT8P50-201ENST00000562022 1438 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 AC008687.5-201ENST00000593746 558 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.25■□□□□ 0.99
PNMA3Q9UL41 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNMA3Q9UL41 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 MIR5100-201ENST00000579544 119 ntBASIC21.24■□□□□ 0.99
PNMA3Q9UL41 AC114341.1-201ENST00000618070 349 ntBASIC21.24■□□□□ 0.99
PNMA3Q9UL41 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PNMA3Q9UL41 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms