Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCM2LQ9NUG4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 AL049637.2-201ENST00000641778 930 ntBASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 AC099398.1-201ENST00000567919 2776 ntBASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
CCM2LQ9NUG4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AP001412.1-201ENST00000608405 714 ntBASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AC012317.2-201ENST00000623305 2251 ntBASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
CCM2LQ9NUG4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 RCN1P1-201ENST00000400413 996 ntBASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 TUBB8P6-201ENST00000436895 1288 ntBASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 TSPY15P-201ENST00000457163 923 ntBASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 MIR4785-201ENST00000585005 73 ntBASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCM2LQ9NUG4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CCM2LQ9NUG4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms