Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NECTIN3Q9NQS3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 BICD1-207ENST00000551848 1962 ntBASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 AC010653.2-201ENST00000623505 997 ntBASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NECTIN3Q9NQS3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 AL354751.1-201ENST00000412768 1863 ntBASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 KRT8P3-201ENST00000519669 1449 ntBASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.73■□□□□ 0.43
NECTIN3Q9NQS3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 AC068880.1-201ENST00000507289 2297 ntBASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 AC005521.1-201ENST00000393351 872 ntBASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 AC010203.1-204ENST00000548782 407 ntBASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 MIR4674-201ENST00000582457 87 ntBASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NECTIN3Q9NQS3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms