Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX8Q9HC52 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX8Q9HC52 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CBX8Q9HC52 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CBX8Q9HC52 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 AC106820.2-201ENST00000563775 3264 ntBASIC20.68■□□□□ 0.9
CBX8Q9HC52 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 AL138781.1-201ENST00000566567 1274 ntBASIC20.68■□□□□ 0.9
CBX8Q9HC52 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX8Q9HC52 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CBX8Q9HC52 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 PRSS44-201ENST00000515154 1146 ntBASIC20.67■□□□□ 0.9
CBX8Q9HC52 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.67■□□□□ 0.9
CBX8Q9HC52 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.67■□□□□ 0.9
CBX8Q9HC52 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX8Q9HC52 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.66■□□□□ 0.9
CBX8Q9HC52 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX8Q9HC52 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CBX8Q9HC52 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX8Q9HC52 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms