Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDX47Q9H0S4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 SLC25A6P5-201ENST00000435663 894 ntBASIC19.3■□□□□ 0.68
DDX47Q9H0S4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 AC142086.2-201ENST00000569753 217 ntBASIC19.3■□□□□ 0.68
DDX47Q9H0S4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 MYLKP1-201ENST00000509077 1580 ntBASIC19.3■□□□□ 0.68
DDX47Q9H0S4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DDX47Q9H0S4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
DDX47Q9H0S4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDX47Q9H0S4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 KRASP1-201ENST00000407852 552 ntBASIC19.28■□□□□ 0.68
DDX47Q9H0S4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 AC004980.1-204ENST00000429707 299 ntBASIC19.28■□□□□ 0.68
DDX47Q9H0S4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 AL023875.1-201ENST00000640777 796 ntBASIC19.28■□□□□ 0.68
DDX47Q9H0S4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DDX47Q9H0S4 HTR7P1-201ENST00000538670 1336 ntBASIC19.27■□□□□ 0.68
DDX47Q9H0S4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX47Q9H0S4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms