Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 PVRIG2P-201ENST00000435460 978 ntBASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 GPR32P1-201ENST00000601788 811 ntBASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AC068587.9-201ENST00000641814 219 ntBASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AC011498.5-201ENST00000592027 486 ntBASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF407Q9C0G0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 TOB2P1-201ENST00000469761 992 ntBASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 UNC93B7-201ENST00000509439 705 ntBASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 AC074051.2-201ENST00000565115 352 ntBASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF407Q9C0G0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 KRT89P-201ENST00000620027 1478 ntBASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 AP002414.4-201ENST00000589764 1148 ntBASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF407Q9C0G0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ZNF407Q9C0G0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF407Q9C0G0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF407Q9C0G0 AC091607.1-201ENST00000490318 1060 ntBASIC16.58■□□□□ 0.25
ZNF407Q9C0G0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 KRT18P1-202ENST00000452408 1331 ntBASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF407Q9C0G0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms