Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 MIR1233-2-201ENST00000408138 82 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 MIR1233-1-201ENST00000408722 82 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC068472.1-201ENST00000474589 881 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC012640.2-201ENST00000561606 901 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 MTDHP3-201ENST00000594186 672 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 TERC-201ENST00000602385 541 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC007952.6-201ENST00000573168 2673 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC003957.1-201ENST00000625108 2673 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PMS2P7-201ENST00000506558 1336 ntBASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 CCS-201ENST00000310190 942 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 DDT-203ENST00000403754 569 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 BX842568.4-201ENST00000421222 227 ntBASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 COX10-202ENST00000429152 875 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SART3-203ENST00000546611 1184 ntBASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 AL049812.1-201ENST00000432563 2267 ntBASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP4-1Q9BYQ7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms