Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.42■□□□□ 0.38
CPPED1Q9BRF8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 MIR564-202ENST00000385049 94 ntBASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 AP000593.1-201ENST00000393668 712 ntBASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPPED1Q9BRF8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 AL023284.2-201ENST00000405850 579 ntBASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 KRT18P6-201ENST00000555540 1265 ntBASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 AL096828.2-201ENST00000567259 1965 ntBASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPPED1Q9BRF8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CPPED1Q9BRF8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.39■□□□□ 0.38
CPPED1Q9BRF8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPPED1Q9BRF8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPPED1Q9BRF8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPPED1Q9BRF8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPPED1Q9BRF8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms