Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 RPSAP43-201ENST00000402237 625 ntBASIC15.56■□□□□ 0.08
FOXC2Q99958 RBM17P3-201ENST00000417687 1192 ntBASIC15.56■□□□□ 0.08
FOXC2Q99958 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.56■□□□□ 0.08
FOXC2Q99958 DNAJB3-201ENST00000446806 729 ntBASIC15.56■□□□□ 0.08
FOXC2Q99958 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXC2Q99958 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXC2Q99958 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXC2Q99958 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXC2Q99958 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXC2Q99958 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
FOXC2Q99958 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
FOXC2Q99958 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXC2Q99958 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
FOXC2Q99958 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 MED15P5-201ENST00000423150 992 ntBASIC15.55■□□□□ 0.08
FOXC2Q99958 GPX1P2-201ENST00000429271 606 ntBASIC15.55■□□□□ 0.08
FOXC2Q99958 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 AC096582.2-201ENST00000510860 516 ntBASIC15.55■□□□□ 0.08
FOXC2Q99958 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXC2Q99958 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 AC010327.4-202ENST00000591484 748 ntBASIC15.55■□□□□ 0.08
FOXC2Q99958 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXC2Q99958 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXC2Q99958 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXC2Q99958 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXC2Q99958 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXC2Q99958 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXC2Q99958 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
FOXC2Q99958 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
FOXC2Q99958 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.54■□□□□ 0.08
FOXC2Q99958 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXC2Q99958 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
FOXC2Q99958 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXC2Q99958 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
FOXC2Q99958 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXC2Q99958 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms