Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NPAS1Q99742 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS1Q99742 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS1Q99742 AL441883.1-201ENST00000566170 1045 ntBASIC16.85■□□□□ 0.29
NPAS1Q99742 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NPAS1Q99742 AC024243.1-201ENST00000609234 778 ntBASIC16.85■□□□□ 0.29
NPAS1Q99742 AC007613.1-201ENST00000572811 2597 ntBASIC16.85■□□□□ 0.29
NPAS1Q99742 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPAS1Q99742 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS1Q99742 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS1Q99742 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS1Q99742 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NPAS1Q99742 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 TMPOP1-202ENST00000424642 1267 ntBASIC16.84■□□□□ 0.29
NPAS1Q99742 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.84■□□□□ 0.29
NPAS1Q99742 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS1Q99742 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS1Q99742 AC011558.1-201ENST00000623459 338 ntBASIC16.84■□□□□ 0.29
NPAS1Q99742 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 AC034236.2-201ENST00000606662 1610 ntBASIC16.84■□□□□ 0.29
NPAS1Q99742 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NPAS1Q99742 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS1Q99742 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS1Q99742 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS1Q99742 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS1Q99742 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
NPAS1Q99742 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS1Q99742 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS1Q99742 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS1Q99742 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.83■□□□□ 0.28
NPAS1Q99742 KRT18P23-201ENST00000435622 1283 ntBASIC16.83■□□□□ 0.28
NPAS1Q99742 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS1Q99742 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS1Q99742 GCSHP2-201ENST00000560971 527 ntBASIC16.83■□□□□ 0.28
NPAS1Q99742 KRT8P50-201ENST00000562022 1438 ntBASIC16.83■□□□□ 0.28
NPAS1Q99742 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS1Q99742 AL138781.2-201ENST00000617896 1843 ntBASIC16.83■□□□□ 0.28
NPAS1Q99742 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS1Q99742 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS1Q99742 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS1Q99742 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS1Q99742 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms