Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF11Q99590 AC140113.2-201ENST00000604370 208 ntBASIC26.53■■□□□ 1.84
SCAF11Q99590 AL139424.1-201ENST00000607572 797 ntBASIC26.53■■□□□ 1.84
SCAF11Q99590 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SCAF11Q99590 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF11Q99590 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF11Q99590 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SCAF11Q99590 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC26.53■■□□□ 1.84
SCAF11Q99590 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF11Q99590 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC26.52■■□□□ 1.84
SCAF11Q99590 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SCAF11Q99590 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.52■■□□□ 1.84
SCAF11Q99590 IGHV3-22-201ENST00000520721 359 ntBASIC26.52■■□□□ 1.84
SCAF11Q99590 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC26.52■■□□□ 1.84
SCAF11Q99590 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SCAF11Q99590 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC26.52■■□□□ 1.84
SCAF11Q99590 AC093484.2-201ENST00000580996 2166 ntBASIC26.52■■□□□ 1.84
SCAF11Q99590 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC26.52■■□□□ 1.84
SCAF11Q99590 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.84
SCAF11Q99590 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF11Q99590 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF11Q99590 AC034236.2-201ENST00000606662 1610 ntBASIC26.51■■□□□ 1.83
SCAF11Q99590 AC098831.1-202ENST00000438821 336 ntBASIC26.51■■□□□ 1.83
SCAF11Q99590 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SCAF11Q99590 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.51■■□□□ 1.83
SCAF11Q99590 AC022898.2-201ENST00000616822 1312 ntBASIC26.51■■□□□ 1.83
SCAF11Q99590 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC26.51■■□□□ 1.83
SCAF11Q99590 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF11Q99590 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.51■■□□□ 1.83
SCAF11Q99590 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF11Q99590 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SCAF11Q99590 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF11Q99590 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF11Q99590 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF11Q99590 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.5■■□□□ 1.83
SCAF11Q99590 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC26.5■■□□□ 1.83
SCAF11Q99590 AC010327.4-202ENST00000591484 748 ntBASIC26.5■■□□□ 1.83
SCAF11Q99590 LINC02084-201ENST00000606069 1096 ntBASIC26.5■■□□□ 1.83
SCAF11Q99590 AC116407.3-201ENST00000623905 1129 ntBASIC26.5■■□□□ 1.83
SCAF11Q99590 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
SCAF11Q99590 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC26.5■■□□□ 1.83
SCAF11Q99590 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SCAF11Q99590 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
SCAF11Q99590 HES2-202ENST00000377836 507 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 CSF3-203ENST00000394148 622 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF11Q99590 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC26.49■■□□□ 1.83
SCAF11Q99590 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 KRT8P32-201ENST00000512863 1461 ntBASIC26.49■■□□□ 1.83
SCAF11Q99590 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC26.49■■□□□ 1.83
SCAF11Q99590 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SCAF11Q99590 AL032819.2-201ENST00000624543 2162 ntBASIC26.49■■□□□ 1.83
SCAF11Q99590 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 RBM17P3-201ENST00000417687 1192 ntBASIC26.49■■□□□ 1.83
SCAF11Q99590 UPF3AP3-201ENST00000420996 769 ntBASIC26.49■■□□□ 1.83
SCAF11Q99590 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 REEP1-209ENST00000541910 969 ntTSL 2 BASIC26.49■■□□□ 1.83
SCAF11Q99590 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF11Q99590 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF11Q99590 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCAF11Q99590 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SCAF11Q99590 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
SCAF11Q99590 AC006333.2-201ENST00000607957 2099 ntBASIC26.48■■□□□ 1.83
SCAF11Q99590 GPX1P2-201ENST00000429271 606 ntBASIC26.48■■□□□ 1.83
SCAF11Q99590 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC26.48■■□□□ 1.83
SCAF11Q99590 THAP5-204ENST00000438865 868 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF11Q99590 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF11Q99590 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.48■■□□□ 1.83
SCAF11Q99590 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF11Q99590 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC26.48■■□□□ 1.83
SCAF11Q99590 AP001160.2-201ENST00000596071 487 ntBASIC26.48■■□□□ 1.83
SCAF11Q99590 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SCAF11Q99590 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCAF11Q99590 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCAF11Q99590 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.47■■□□□ 1.83
SCAF11Q99590 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SCAF11Q99590 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCAF11Q99590 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.47■■□□□ 1.83
SCAF11Q99590 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC26.47■■□□□ 1.83
SCAF11Q99590 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.47■■□□□ 1.83
SCAF11Q99590 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC26.47■■□□□ 1.83
SCAF11Q99590 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.47■■□□□ 1.83
SCAF11Q99590 AC005336.2-201ENST00000593183 939 ntBASIC26.47■■□□□ 1.83
SCAF11Q99590 FAM197Y3-203ENST00000618346 717 ntBASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms