Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 MIR638-201ENST00000385237 100 ntBASIC17.45■□□□□ 0.38
NR1H4Q96RI1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NR1H4Q96RI1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 REXO1L9P-201ENST00000604264 2108 ntBASIC17.44■□□□□ 0.38
NR1H4Q96RI1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 AC010141.2-201ENST00000452426 721 ntBASIC17.44■□□□□ 0.38
NR1H4Q96RI1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 AC104187.1-201ENST00000607510 612 ntBASIC17.44■□□□□ 0.38
NR1H4Q96RI1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H4Q96RI1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 SLC7A5P2-201ENST00000553010 536 ntBASIC17.43■□□□□ 0.38
NR1H4Q96RI1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 RBM17P2-201ENST00000616397 1405 ntBASIC17.43■□□□□ 0.38
NR1H4Q96RI1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
NR1H4Q96RI1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.42■□□□□ 0.38
NR1H4Q96RI1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NR1H4Q96RI1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms