Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AP003041.3-201ENST00000527151 707 ntBASIC21.98■■□□□ 1.11
DDX11Q96FC9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
DDX11Q96FC9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
DDX11Q96FC9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 UPK3BP1-201ENST00000428678 509 ntBASIC21.97■■□□□ 1.11
DDX11Q96FC9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 MYC-208ENST00000641036 567 ntBASIC21.97■■□□□ 1.11
DDX11Q96FC9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
DDX11Q96FC9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX11Q96FC9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 HEIH-201ENST00000623091 1652 ntBASIC21.96■■□□□ 1.11
DDX11Q96FC9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX11Q96FC9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX11Q96FC9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
DDX11Q96FC9 AL499627.1-201ENST00000569373 2188 ntBASIC21.95■■□□□ 1.1
DDX11Q96FC9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.95■■□□□ 1.1
DDX11Q96FC9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX11Q96FC9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX11Q96FC9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX11Q96FC9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms