Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 KRT18P41-201ENST00000518924 1277 ntBASIC20.03■□□□□ 0.8
PGBD4Q96DM1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD4Q96DM1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 KRT8P50-201ENST00000562022 1438 ntBASIC20.02■□□□□ 0.8
PGBD4Q96DM1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 DRAXINP1-201ENST00000437611 948 ntBASIC20.02■□□□□ 0.8
PGBD4Q96DM1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 GPR32P1-201ENST00000601788 811 ntBASIC20.02■□□□□ 0.8
PGBD4Q96DM1 AL390719.2-201ENST00000606993 987 ntBASIC20.02■□□□□ 0.8
PGBD4Q96DM1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD4Q96DM1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 MTMR9LP-203ENST00000426597 1545 ntBASIC20.02■□□□□ 0.79
PGBD4Q96DM1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.02■□□□□ 0.79
PGBD4Q96DM1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 AC083906.6-201ENST00000641366 219 ntBASIC20.01■□□□□ 0.79
PGBD4Q96DM1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD4Q96DM1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20■□□□□ 0.79
PGBD4Q96DM1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PGBD4Q96DM1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20■□□□□ 0.79
PGBD4Q96DM1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PGBD4Q96DM1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20■□□□□ 0.79
PGBD4Q96DM1 NUS1P1-201ENST00000446295 882 ntBASIC20■□□□□ 0.79
PGBD4Q96DM1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20■□□□□ 0.79
PGBD4Q96DM1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20■□□□□ 0.79
PGBD4Q96DM1 IGHV3-41-201ENST00000613121 348 ntBASIC20■□□□□ 0.79
PGBD4Q96DM1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms