Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 AC133041.1-202ENST00000642053 222 ntBASIC17.63■□□□□ 0.41
LRRC58Q96CX6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 HTR7P1-201ENST00000538670 1336 ntBASIC17.63■□□□□ 0.41
LRRC58Q96CX6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.63■□□□□ 0.41
LRRC58Q96CX6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 HLA-L-209ENST00000420110 1011 ntBASIC17.62■□□□□ 0.41
LRRC58Q96CX6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.62■□□□□ 0.41
LRRC58Q96CX6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 RCC2P3-201ENST00000418112 1537 ntBASIC17.62■□□□□ 0.41
LRRC58Q96CX6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC58Q96CX6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 AC069152.1-201ENST00000438030 544 ntBASIC17.61■□□□□ 0.41
LRRC58Q96CX6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 MTDHP1-201ENST00000605323 784 ntBASIC17.61■□□□□ 0.41
LRRC58Q96CX6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
LRRC58Q96CX6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC58Q96CX6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms