Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF1Q92994 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF1Q92994 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF1Q92994 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF1Q92994 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
BRF1Q92994 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF1Q92994 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF1Q92994 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 LINC01568-207ENST00000641790 1380 ntBASIC21.78■■□□□ 1.08
BRF1Q92994 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 AP000593.1-201ENST00000393668 712 ntBASIC21.78■■□□□ 1.08
BRF1Q92994 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRF1Q92994 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF1Q92994 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF1Q92994 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF1Q92994 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
BRF1Q92994 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BRF1Q92994 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.77■■□□□ 1.08
BRF1Q92994 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 KRT18P23-201ENST00000435622 1283 ntBASIC21.77■■□□□ 1.08
BRF1Q92994 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.77■■□□□ 1.08
BRF1Q92994 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.77■■□□□ 1.08
BRF1Q92994 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.77■■□□□ 1.08
BRF1Q92994 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.77■■□□□ 1.08
BRF1Q92994 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.77■■□□□ 1.08
BRF1Q92994 HOXB1-202ENST00000577092 1414 ntBASIC21.77■■□□□ 1.08
BRF1Q92994 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BRF1Q92994 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
BRF1Q92994 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF1Q92994 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.77■■□□□ 1.07
BRF1Q92994 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRF1Q92994 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
BRF1Q92994 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.76■■□□□ 1.07
BRF1Q92994 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.76■■□□□ 1.07
BRF1Q92994 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
BRF1Q92994 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
BRF1Q92994 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 AC135776.1-201ENST00000319817 2481 ntBASIC21.76■■□□□ 1.07
BRF1Q92994 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.76■■□□□ 1.07
BRF1Q92994 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
BRF1Q92994 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.76■■□□□ 1.07
BRF1Q92994 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.76■■□□□ 1.07
BRF1Q92994 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF1Q92994 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.75■■□□□ 1.07
BRF1Q92994 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.75■■□□□ 1.07
BRF1Q92994 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF1Q92994 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF1Q92994 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
BRF1Q92994 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF1Q92994 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 ESPNP-201ENST00000270691 2015 ntBASIC21.75■■□□□ 1.07
BRF1Q92994 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF1Q92994 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.75■■□□□ 1.07
BRF1Q92994 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF1Q92994 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF1Q92994 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms