Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 IGHV3-47-201ENST00000425060 335 ntBASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 AC005332.3-201ENST00000589904 676 ntBASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.13■□□□□ 0.97
U2AF1L4Q8WU68 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2AF1L4Q8WU68 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 PMS2P7-201ENST00000506558 1336 ntBASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 BX842568.4-201ENST00000421222 227 ntBASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 MCCD1P1-208ENST00000445732 328 ntBASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2AF1L4Q8WU68 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 RNF165-205ENST00000588679 2904 ntBASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 AL031284.1-201ENST00000419297 478 ntBASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 FAM197Y8-203ENST00000450145 560 ntBASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 AC106730.1-201ENST00000566722 1090 ntBASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
U2AF1L4Q8WU68 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms