Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 FAM220CP-201ENST00000395253 831 ntBASIC22.48■■□□□ 1.19
SNED1Q8TER0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.48■■□□□ 1.19
SNED1Q8TER0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SNED1Q8TER0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 HEIH-201ENST00000623091 1652 ntBASIC22.47■■□□□ 1.19
SNED1Q8TER0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 AC116407.3-201ENST00000623905 1129 ntBASIC22.47■■□□□ 1.19
SNED1Q8TER0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNED1Q8TER0 AC141586.3-201ENST00000562166 1838 ntBASIC22.47■■□□□ 1.19
SNED1Q8TER0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SNED1Q8TER0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.46■■□□□ 1.19
SNED1Q8TER0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNED1Q8TER0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.46■■□□□ 1.19
SNED1Q8TER0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 TERC-201ENST00000602385 541 ntBASIC22.45■■□□□ 1.18
SNED1Q8TER0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 AL138831.2-201ENST00000606564 490 ntBASIC22.45■■□□□ 1.18
SNED1Q8TER0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 AC112777.1-201ENST00000540175 1423 ntBASIC22.45■■□□□ 1.18
SNED1Q8TER0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNED1Q8TER0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.45■■□□□ 1.18
SNED1Q8TER0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 TP73-AS1-210ENST00000637775 1455 ntBASIC22.44■■□□□ 1.18
SNED1Q8TER0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.44■■□□□ 1.18
SNED1Q8TER0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNED1Q8TER0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 AC093909.1-201ENST00000504731 1122 ntBASIC22.44■■□□□ 1.18
SNED1Q8TER0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
SNED1Q8TER0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms