Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AC083906.6-201ENST00000641366 219 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AC079781.4-201ENST00000641908 219 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AC239800.4-201ENST00000603712 296 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AL391422.3-201ENST00000603791 2761 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 AL139288.1-201ENST00000623748 933 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC12.43□□□□□ -0.42
ALMS1Q8TCU4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 NKAPP1-205ENST00000585790 367 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AC012645.4-201ENST00000610691 1061 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AC002310.6-201ENST00000624451 1377 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AL031432.2-201ENST00000566714 459 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AL928711.1-201ENST00000570165 459 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AC092865.6-201ENST00000642101 219 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 KRT18P28-201ENST00000453838 1332 ntBASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.42□□□□□ -0.42
ALMS1Q8TCU4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 AC107918.4-202ENST00000641623 219 ntBASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ALMS1Q8TCU4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms