Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 AC135776.1-201ENST00000319817 2481 ntBASIC19.23■□□□□ 0.67
CCDC89Q8N998 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 RCC2P3-201ENST00000418112 1537 ntBASIC19.22■□□□□ 0.67
CCDC89Q8N998 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 FAM207BP-201ENST00000447172 505 ntBASIC19.22■□□□□ 0.67
CCDC89Q8N998 RPPH1-201ENST00000516869 333 ntBASIC19.22■□□□□ 0.67
CCDC89Q8N998 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 AF186192.3-201ENST00000583427 947 ntBASIC19.22■□□□□ 0.67
CCDC89Q8N998 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 AC073195.1-201ENST00000607241 877 ntBASIC19.22■□□□□ 0.67
CCDC89Q8N998 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC89Q8N998 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC89Q8N998 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 AC008764.6-201ENST00000595909 2069 ntBASIC19.21■□□□□ 0.67
CCDC89Q8N998 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 RARRES2P10-201ENST00000564312 460 ntBASIC19.21■□□□□ 0.67
CCDC89Q8N998 CKBP1-201ENST00000565489 1086 ntBASIC19.21■□□□□ 0.67
CCDC89Q8N998 MIR4651-201ENST00000582622 73 ntBASIC19.21■□□□□ 0.67
CCDC89Q8N998 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC89Q8N998 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC89Q8N998 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CCDC89Q8N998 AC067852.2-201ENST00000590513 2313 ntBASIC19.2■□□□□ 0.66
CCDC89Q8N998 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC89Q8N998 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC89Q8N998 FAM197Y4-202ENST00000622692 608 ntBASIC19.2■□□□□ 0.66
CCDC89Q8N998 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms