Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 KRT8P11-201ENST00000409686 1436 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 UNC93B2-201ENST00000285383 730 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 MESTP1-201ENST00000404287 994 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AC087499.1-201ENST00000418141 1075 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AP000525.1-201ENST00000608286 694 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AC093677.2-201ENST00000600169 1863 ntBASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDHR3Q6ZTQ4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 AL357033.4-201ENST00000617703 1807 ntBASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 ECEL1P3-201ENST00000427961 737 ntBASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 MIR6786-201ENST00000616843 113 ntBASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.59■□□□□ 0.57
CDHR3Q6ZTQ4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDHR3Q6ZTQ4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 AC011506.1-201ENST00000474329 610 ntBASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.58■□□□□ 0.56
CDHR3Q6ZTQ4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 AC134043.2-201ENST00000624206 2238 ntBASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.57■□□□□ 0.56
CDHR3Q6ZTQ4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms