Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 MCCD1P1-208ENST00000445732 328 ntBASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 AC020916.1-201ENST00000587762 1774 ntBASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 WWOX-216ENST00000569818 525 ntBASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC010653.2-201ENST00000623505 997 ntBASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC138932.1-201ENST00000534164 6830 ntBASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NHLRC1Q6VVB1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 BX088651.1-201ENST00000540551 451 ntBASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 C2orf69P3-201ENST00000565542 1120 ntBASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 AC116562.4-202ENST00000641738 218 ntBASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 AC126763.1-201ENST00000552015 2118 ntBASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 AC112777.1-201ENST00000540175 1423 ntBASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.61■□□□□ 0.25
NHLRC1Q6VVB1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 AC090164.3-201ENST00000610780 2143 ntBASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NHLRC1Q6VVB1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms