Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 AF186192.3-201ENST00000583427 947 ntBASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 AC073195.1-201ENST00000607241 877 ntBASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 MIR6786-201ENST00000616843 113 ntBASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 MESTP1-201ENST00000404287 994 ntBASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 RARRES2P10-201ENST00000564312 460 ntBASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 AC006058.3-201ENST00000606217 1069 ntBASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 AP000692.2-201ENST00000608391 879 ntBASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRIF1Q5T3J3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LRIF1Q5T3J3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AL023284.2-201ENST00000405850 579 ntBASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIF1Q5T3J3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIF1Q5T3J3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms