Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 AC004263.2-201ENST00000617183 678 ntBASIC22.16■■□□□ 1.14
PDS5AQ29RF7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 AC233702.3-201ENST00000578656 1387 ntBASIC22.16■■□□□ 1.14
PDS5AQ29RF7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 IGHV3-41-201ENST00000613121 348 ntBASIC22.15■■□□□ 1.14
PDS5AQ29RF7 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.15■■□□□ 1.14
PDS5AQ29RF7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 ANO7L1-203ENST00000602586 1720 ntBASIC22.15■■□□□ 1.14
PDS5AQ29RF7 AL499627.1-201ENST00000569373 2188 ntBASIC22.15■■□□□ 1.14
PDS5AQ29RF7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PDS5AQ29RF7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.14■■□□□ 1.14
PDS5AQ29RF7 AL691432.3-201ENST00000621860 400 ntBASIC22.14■■□□□ 1.14
PDS5AQ29RF7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.14■■□□□ 1.13
PDS5AQ29RF7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 AL845331.1-201ENST00000424978 1190 ntBASIC22.13■■□□□ 1.13
PDS5AQ29RF7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PDS5AQ29RF7 AL031598.1-201ENST00000561511 1773 ntBASIC22.13■■□□□ 1.13
PDS5AQ29RF7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 TSPY19P-201ENST00000418461 509 ntBASIC22.12■■□□□ 1.13
PDS5AQ29RF7 TSPY18P-201ENST00000441642 509 ntBASIC22.12■■□□□ 1.13
PDS5AQ29RF7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PDS5AQ29RF7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 IGHV3-47-201ENST00000425060 335 ntBASIC22.11■■□□□ 1.13
PDS5AQ29RF7 AP000867.3-201ENST00000524675 377 ntBASIC22.11■■□□□ 1.13
PDS5AQ29RF7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 Z69720.1-201ENST00000601483 472 ntBASIC22.11■■□□□ 1.13
PDS5AQ29RF7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
PDS5AQ29RF7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.1■■□□□ 1.13
PDS5AQ29RF7 AC111152.3-201ENST00000569699 673 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms