Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK3Q00526 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK3Q00526 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK3Q00526 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.19■□□□□ 0.5
CDK3Q00526 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK3Q00526 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK3Q00526 AC093458.2-201ENST00000623150 629 ntBASIC18.19■□□□□ 0.5
CDK3Q00526 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK3Q00526 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK3Q00526 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK3Q00526 AC009102.3-201ENST00000623118 1491 ntBASIC18.19■□□□□ 0.5
CDK3Q00526 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK3Q00526 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
CDK3Q00526 AL031598.1-201ENST00000561511 1773 ntBASIC18.18■□□□□ 0.5
CDK3Q00526 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDK3Q00526 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDK3Q00526 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CDK3Q00526 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK3Q00526 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK3Q00526 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK3Q00526 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDK3Q00526 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 AP000974.1-201ENST00000623909 2387 ntBASIC18.18■□□□□ 0.5
CDK3Q00526 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK3Q00526 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK3Q00526 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK3Q00526 AC099343.3-201ENST00000605834 2503 ntBASIC18.17■□□□□ 0.5
CDK3Q00526 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK3Q00526 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK3Q00526 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK3Q00526 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CDK3Q00526 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK3Q00526 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 CROCCP3-202ENST00000420820 1947 ntBASIC18.17■□□□□ 0.5
CDK3Q00526 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK3Q00526 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDK3Q00526 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK3Q00526 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK3Q00526 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDK3Q00526 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 KRT18P48-201ENST00000434763 852 ntBASIC18.16■□□□□ 0.5
CDK3Q00526 RNF126P1-202ENST00000569893 925 ntBASIC18.16■□□□□ 0.5
CDK3Q00526 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK3Q00526 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.16■□□□□ 0.5
CDK3Q00526 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 AC024563.2-201ENST00000603282 481 ntBASIC18.16■□□□□ 0.5
CDK3Q00526 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK3Q00526 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.16■□□□□ 0.5
CDK3Q00526 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDK3Q00526 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
CDK3Q00526 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.16■□□□□ 0.5
CDK3Q00526 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.15■□□□□ 0.5
CDK3Q00526 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK3Q00526 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK3Q00526 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK3Q00526 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDK3Q00526 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK3Q00526 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDK3Q00526 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 AP003733.1-201ENST00000491725 852 ntBASIC18.15■□□□□ 0.5
CDK3Q00526 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.15■□□□□ 0.5
CDK3Q00526 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.15■□□□□ 0.5
CDK3Q00526 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms