Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.43□□□□□ -0.58
HSPG2P98160 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 AP000867.4-201ENST00000641616 219 ntBASIC11.43□□□□□ -0.58
HSPG2P98160 AC099343.3-201ENST00000605834 2503 ntBASIC11.43□□□□□ -0.58
HSPG2P98160 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.42□□□□□ -0.58
HSPG2P98160 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.42□□□□□ -0.58
HSPG2P98160 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HSPG2P98160 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.42□□□□□ -0.58
HSPG2P98160 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
HSPG2P98160 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.42□□□□□ -0.58
HSPG2P98160 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.42□□□□□ -0.58
HSPG2P98160 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC11.42□□□□□ -0.58
HSPG2P98160 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
HSPG2P98160 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 ME2-216ENST00000639850 2331 ntTSL 5 BASIC11.42□□□□□ -0.58
HSPG2P98160 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 AC092474.2-201ENST00000424288 719 ntBASIC11.42□□□□□ -0.58
HSPG2P98160 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.42□□□□□ -0.58
HSPG2P98160 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HSPG2P98160 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HSPG2P98160 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HSPG2P98160 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.42□□□□□ -0.58
HSPG2P98160 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.42□□□□□ -0.58
HSPG2P98160 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.42□□□□□ -0.58
HSPG2P98160 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
HSPG2P98160 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 SIGLEC30P-201ENST00000455569 941 ntBASIC11.41□□□□□ -0.58
HSPG2P98160 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.41□□□□□ -0.58
HSPG2P98160 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.41□□□□□ -0.58
HSPG2P98160 AL139288.1-201ENST00000623748 933 ntBASIC11.41□□□□□ -0.58
HSPG2P98160 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 STK25-234ENST00000535007 2459 ntTSL 2 BASIC11.41□□□□□ -0.58
HSPG2P98160 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 AC015922.1-201ENST00000421102 1152 ntBASIC11.41□□□□□ -0.58
HSPG2P98160 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.41□□□□□ -0.58
HSPG2P98160 UGT1A2P-201ENST00000454886 866 ntBASIC11.41□□□□□ -0.58
HSPG2P98160 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 AJ011932.1-201ENST00000621707 465 ntBASIC11.41□□□□□ -0.58
HSPG2P98160 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HSPG2P98160 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
HSPG2P98160 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms