Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAE1P78406 AL163051.1-201ENST00000569214 1512 ntBASIC17.57■□□□□ 0.4
RAE1P78406 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
RAE1P78406 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 SDHAP2-201ENST00000455183 2001 ntBASIC17.57■□□□□ 0.4
RAE1P78406 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.57■□□□□ 0.4
RAE1P78406 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.57■□□□□ 0.4
RAE1P78406 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.57■□□□□ 0.4
RAE1P78406 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RAE1P78406 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.57■□□□□ 0.4
RAE1P78406 C2orf69P3-201ENST00000565542 1120 ntBASIC17.57■□□□□ 0.4
RAE1P78406 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
RAE1P78406 AC010947.1-201ENST00000623454 693 ntBASIC17.57■□□□□ 0.4
RAE1P78406 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAE1P78406 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 AC068880.1-201ENST00000507289 2297 ntBASIC17.56■□□□□ 0.4
RAE1P78406 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAE1P78406 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 KRT18P23-201ENST00000435622 1283 ntBASIC17.56■□□□□ 0.4
RAE1P78406 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.56■□□□□ 0.4
RAE1P78406 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.56■□□□□ 0.4
RAE1P78406 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAE1P78406 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAE1P78406 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAE1P78406 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.56■□□□□ 0.4
RAE1P78406 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.56■□□□□ 0.4
RAE1P78406 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RAE1P78406 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.55■□□□□ 0.4
RAE1P78406 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 EGLN1P1-201ENST00000531623 762 ntBASIC17.55■□□□□ 0.4
RAE1P78406 AC010653.2-201ENST00000623505 997 ntBASIC17.55■□□□□ 0.4
RAE1P78406 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAE1P78406 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.55■□□□□ 0.4
RAE1P78406 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.55■□□□□ 0.4
RAE1P78406 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
RAE1P78406 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAE1P78406 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
RAE1P78406 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAE1P78406 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RAE1P78406 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAE1P78406 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAE1P78406 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.54■□□□□ 0.4
RAE1P78406 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAE1P78406 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAE1P78406 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAE1P78406 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.54■□□□□ 0.4
RAE1P78406 AL596275.1-201ENST00000423464 877 ntBASIC17.54■□□□□ 0.4
RAE1P78406 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.54■□□□□ 0.4
RAE1P78406 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms