Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.81□□□□□ -0.2
CMC4P56277 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.81□□□□□ -0.2
CMC4P56277 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CMC4P56277 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 RCN1P1-201ENST00000400413 996 ntBASIC13.8□□□□□ -0.2
CMC4P56277 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.8□□□□□ -0.2
CMC4P56277 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.8□□□□□ -0.2
CMC4P56277 KRT18P21-201ENST00000515767 1272 ntBASIC13.8□□□□□ -0.2
CMC4P56277 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.8□□□□□ -0.2
CMC4P56277 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 AL049597.2-201ENST00000565575 961 ntBASIC13.8□□□□□ -0.2
CMC4P56277 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.8□□□□□ -0.2
CMC4P56277 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CMC4P56277 AC139887.4-201ENST00000607877 719 ntBASIC13.8□□□□□ -0.2
CMC4P56277 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.8□□□□□ -0.2
CMC4P56277 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.8□□□□□ -0.2
CMC4P56277 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CMC4P56277 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CMC4P56277 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CMC4P56277 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 MYLKP1-201ENST00000509077 1580 ntBASIC13.79□□□□□ -0.2
CMC4P56277 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CMC4P56277 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CMC4P56277 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.79□□□□□ -0.2
CMC4P56277 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 STARP1-201ENST00000397973 869 ntBASIC13.79□□□□□ -0.2
CMC4P56277 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.79□□□□□ -0.2
CMC4P56277 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.79□□□□□ -0.2
CMC4P56277 KRT18P57-201ENST00000443599 1254 ntBASIC13.79□□□□□ -0.2
CMC4P56277 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.79□□□□□ -0.2
CMC4P56277 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.79□□□□□ -0.2
CMC4P56277 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.79□□□□□ -0.2
CMC4P56277 MIR3917-201ENST00000580971 93 ntBASIC13.79□□□□□ -0.2
CMC4P56277 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.79□□□□□ -0.2
CMC4P56277 AC010240.3-201ENST00000607688 395 ntBASIC13.79□□□□□ -0.2
CMC4P56277 AC024243.1-201ENST00000609234 778 ntBASIC13.79□□□□□ -0.2
CMC4P56277 AC011558.1-201ENST00000623459 338 ntBASIC13.79□□□□□ -0.2
CMC4P56277 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.79□□□□□ -0.2
CMC4P56277 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 AL049812.1-201ENST00000432563 2267 ntBASIC13.79□□□□□ -0.2
CMC4P56277 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.79□□□□□ -0.2
CMC4P56277 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.79□□□□□ -0.2
CMC4P56277 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CMC4P56277 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.78□□□□□ -0.2
CMC4P56277 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CMC4P56277 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CMC4P56277 MIR149-201ENST00000384879 89 ntBASIC13.78□□□□□ -0.2
CMC4P56277 AC117947.1-201ENST00000427448 529 ntBASIC13.78□□□□□ -0.2
CMC4P56277 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.78□□□□□ -0.2
CMC4P56277 RN7SL850P-201ENST00000579959 291 ntBASIC13.78□□□□□ -0.2
CMC4P56277 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.78□□□□□ -0.2
CMC4P56277 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.78□□□□□ -0.2
CMC4P56277 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CMC4P56277 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
CMC4P56277 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms