Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PAX9P55771 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.86□□□□□ -0.03
PAX9P55771 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.86□□□□□ -0.03
PAX9P55771 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 MYC-209ENST00000641252 345 ntBASIC14.86□□□□□ -0.03
PAX9P55771 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PAX9P55771 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PAX9P55771 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.86□□□□□ -0.03
PAX9P55771 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.85□□□□□ -0.03
PAX9P55771 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.85□□□□□ -0.03
PAX9P55771 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PAX9P55771 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PAX9P55771 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.85□□□□□ -0.03
PAX9P55771 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.85□□□□□ -0.03
PAX9P55771 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.85□□□□□ -0.03
PAX9P55771 AC083906.2-201ENST00000511578 360 ntBASIC14.85□□□□□ -0.03
PAX9P55771 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.85□□□□□ -0.03
PAX9P55771 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.85□□□□□ -0.03
PAX9P55771 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.85□□□□□ -0.03
PAX9P55771 SOX15-203ENST00000570788 1093 ntBASIC14.85□□□□□ -0.03
PAX9P55771 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 HTR7P1-201ENST00000538670 1336 ntBASIC14.85□□□□□ -0.03
PAX9P55771 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.85□□□□□ -0.03
PAX9P55771 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.85□□□□□ -0.03
PAX9P55771 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PAX9P55771 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms