Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 AC104390.1-201ENST00000555663 520 ntBASIC19.62■□□□□ 0.73
CACNA2D1P54289 MIR3917-201ENST00000580971 93 ntBASIC19.62■□□□□ 0.73
CACNA2D1P54289 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AC099343.3-201ENST00000605834 2503 ntBASIC19.61■□□□□ 0.73
CACNA2D1P54289 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AC010240.3-201ENST00000607688 395 ntBASIC19.61■□□□□ 0.73
CACNA2D1P54289 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CACNA2D1P54289 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CACNA2D1P54289 KRT8P50-201ENST00000562022 1438 ntBASIC19.6■□□□□ 0.73
CACNA2D1P54289 LINC01311-201ENST00000565162 1445 ntBASIC19.6■□□□□ 0.73
CACNA2D1P54289 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 HBZP1-201ENST00000354915 429 ntBASIC19.6■□□□□ 0.73
CACNA2D1P54289 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.6■□□□□ 0.73
CACNA2D1P54289 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CACNA2D1P54289 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CACNA2D1P54289 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 VENTXP5-201ENST00000523979 775 ntBASIC19.59■□□□□ 0.73
CACNA2D1P54289 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 AL121956.5-201ENST00000625261 221 ntBASIC19.59■□□□□ 0.73
CACNA2D1P54289 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 KRT8P7-201ENST00000533003 1432 ntBASIC19.59■□□□□ 0.73
CACNA2D1P54289 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA2D1P54289 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA2D1P54289 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms